Events
Upcoming and past events hosted by the Core. Please get in touch if you’d like to advertise a talk or organize a discussion around ongoing research, a paper, or something else.
Most talks are recorded. Contact manonragonnet@uchicago.edu for copies.
CEIRR Network Meeting 2024 Tool Showcase
Prof Sarah Cobey (U. Chicago) leads a breakout session showcasing new computational tools. Katia Koelle, Jordan Ort, Yiquan Wang, Zane Billings, Alexey Markin, Carl Hutter and Tavis Anderson prsent their new tools and methods on H5 nextclade assignment, transmission bottleneck estimation, models for censored immunological data, reassortment inference, predicting adaptive immune receptors, phylogenetic libraries, and pipelines for calling SNVs.
CEIRR Network Meeting 2023 Tool Showcase
Prof Sarah Cobey (U. Chicago) leads a breakout session showcasing new computational tools. Louise Moncla, Alexei Markin, Manon Ragonnet, Tavis Anderson and Jesse Bloom will present demos of tools for visualizing HA evolution, identifying reassortment, manipulating and visualizing phylogenies, and estimating antibody escape.
Andreas Handel on Modeling Immune Dynamics
Dr Andreas Handel is a Professor in the Department of Epidemiology and Biostatistics, College of Public Health, at the University of Georgia (UGA).
Dr Handel will introduce and discuss a few R-based tools that can help individuals learn about and implement mechanistic within-host models. He will focus on the DSAIRM and modelbuilder R packages and the Simulation Modeling in Immunology resource. Read more